001 /*
002 * InvalidSequenceException.java
003 *
004 * Copyright 2003 Sergio Anibal de Carvalho Junior
005 *
006 * This file is part of NeoBio.
007 *
008 * NeoBio is free software; you can redistribute it and/or modify it under the terms of
009 * the GNU General Public License as published by the Free Software Foundation; either
010 * version 2 of the License, or (at your option) any later version.
011 *
012 * NeoBio is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
013 * without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
014 * PURPOSE. See the GNU General Public License for more details.
015 *
016 * You should have received a copy of the GNU General Public License along with NeoBio;
017 * if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330,
018 * Boston, MA 02111-1307, USA.
019 *
020 * Proper attribution of the author as the source of the software would be appreciated.
021 *
022 * Sergio Anibal de Carvalho Junior mailto:sergioanibaljr@users.sourceforge.net
023 * Department of Computer Science http://www.dcs.kcl.ac.uk
024 * King's College London, UK http://www.kcl.ac.uk
025 *
026 * Please visit http://neobio.sourceforge.net
027 *
028 * This project was supervised by Professor Maxime Crochemore.
029 *
030 */
031
032 package neobio.alignment;
033
034 /**
035 * Signals that the sequence does not comply with the specification (see
036 * {@linkplain CharSequence} or {@linkplain FactorSequence} for details).
037 *
038 * @author Sergio A. de Carvalho Jr.
039 * @see CharSequence
040 * @see FactorSequence
041 */
042 public class InvalidSequenceException extends Exception
043 {
044 /**
045 * Constructs an <CODE>InvalidSequenceException</CODE> with null as its
046 * error detail message.
047 */
048 public InvalidSequenceException ()
049 {
050 super();
051 }
052
053 /**
054 * Constructs an <CODE>InvalidSequenceException</CODE> with the specified
055 * detail message.
056 *
057 * @param message an error message
058 */
059 public InvalidSequenceException (String message)
060 {
061 super(message);
062 }
063
064 /**
065 * Constructs an <CODE>InvalidSequenceException</CODE> with the specified
066 * cause (and a detail message that typically contains the class and detail message
067 * of cause).
068 *
069 * @param cause a cause
070 */
071 public InvalidSequenceException (Throwable cause)
072 {
073 super(cause);
074 }
075
076 /**
077 * Constructs an <CODE>InvalidSequenceException</CODE> with the specified
078 * detail message and cause.
079 *
080 * @param message an error message
081 * @param cause a cause
082 */
083 public InvalidSequenceException (String message, Throwable cause)
084 {
085 super(message, cause);
086 }
087 }